Stem-loop odi-let-7d

Accession

MI0007139

Description

Oikopleura dioica odi-let-7d precursor miRNA

Sequence

cgccaguuccguuUGAGGUAGUGGGUUGUAUCGCUgagggaacuaaaguuucacccuggcgcugcaacaaacuacccccuacggcgcguggugcuacucg
(((((((.((((..(.((((((..((((((.((((.(((((((....)))...)))))))).))))))..)))))).)..)))).)).))))).......

Structure

-------     -  u    uU A      GG      U    g    ---   u 
       cgcca gu ccgu  G GGUAGU  GUUGUA CGCU aggg   aac a
       ||||| || ||||  | ||||||  |||||| |||| ||||   |||  
       guggu cg ggca  c ccauca  caacgu gcgg uccc   uug a
gcucauc     g  c    uc c      aa      c    -    acu   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-let-7d

• Accession: MIMAT0006077
• Description: Oikopleura dioica odi-let-7d mature miRNA
• Sequence: 14 - UGAGGUAGUGGGUUGUAUCGCU - 35
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080