Stem-loop odi-mir-124b

Accession

MI0007146

Description

Oikopleura dioica odi-mir-124b precursor miRNA

Gene family

MIPF0000021; mir-124

Sequence

ccgcuaccgggcuuaauuaguauucgcaagagcugcuugagaagugcucgauucuagcaucguucUAAGGCACUCGGUGAAUGCUAAaugagcucuggaaua
......(((((((((.(((((((((((..(((.(((((.(((((((((.......)))))..)))).)))))))).))))))))))).))))).))))....

Structure

ccgcua    -     a           aa   c     g    --     cg 
      ccgg gcuua uuaguauucgc  gag ugcuu agaa  gugcu  a
      |||| ||||| |||||||||||  ||| ||||| ||||  |||||  u
      gguc cgagu AAUCGUAAGUG  CUC ACGGA Ucuu  uacga  u
--auaa    u     a           -G   -     A    gc     uc 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-124b

• Accession: MIMAT0006083
• Description: Oikopleura dioica odi-miR-124b mature miRNA
• Sequence: 66 - UAAGGCACUCGGUGAAUGCUAA - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080