Stem-loop gma-MIR164a

Accession

MI0007209

Description

Glycine max gma-MIR164a precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

17 open access papers mention gma-MIR164a
(43 sentences)

Sequence

agcuccuuguUGGAGAAGCAGGGCACGUGCAagucucuuggaucucaaaugccacugaacccuuugcacgugcuccccuucuccaacacggguuu
.((.((.(((((((((((..(((((((((((((..((.(((..........)))..))....)))))))))))))..))))))))))).))))..

Structure

-a  u  u           CA             --uc  -u   aucu 
  gc cc uguUGGAGAAG  GGGCACGUGCAag    uc  ugg    c
  || || |||||||||||  |||||||||||||    ||  |||     
  ug gg acaaccucuuc  cucgugcacguuu    ag  acc    a
uu  -  c           cc             ccca  uc   guaa 

Annotation confidence Not enough data

Genome context

chr19: 49681250-49681344 [+]

Mature gma-miR164a

• Accession: MIMAT0007354
• Description: Glycine max gma-miR164a mature miRNA
• Sequence: 11 - UGGAGAAGCAGGGCACGUGCA - 31
• Evidence: experimental ; 454 [1], Northern [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160