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miRBase |
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Stem-loop sequence mdo-mir-1549 |
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Accession | MI0007274 (change log) | |||||
Description | Monodelphis domestica miR-1549 stem-loop | |||||
Gene family | MIPF0001345; mir-1549 | |||||
Stem-loop |
-cuc c - ua u u 5' gccgggcu guag g gaagc gag u |||||||| |||| | ||||| ||| u 3' uggcccga cguc c cuucg uuu u ucga a c gc u g |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
This sequence is referred to by the unofficial identifier Mdo-315 in [1]. |
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence mdo-miR-1549-5p |
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Accession | MIMAT0026773 |
Sequence |
2 - ucgccgggcucguagguagaagc - 24 |
Deep sequencing | 8972 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Predicted targets |
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Mature sequence mdo-miR-1549-3p |
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Accession | MIMAT0006149 |
Sequence |
40 - uuccgcccugcaagcccggua - 60 |
Deep sequencing | 31971 reads, 5 experiments |
Evidence | experimental; cloned [1], Illumina [2] |
Predicted targets |
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References |
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1 | |
2 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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