Stem-loop gga-mir-1635

Accession

MI0007365

Description

Gallus gallus gga-mir-1635 precursor miRNA

Literature search

1 open access papers mention gga-mir-1635
(8 sentences)

Sequence

8 reads, 0 reads per million, 3 experiments

ggaccugccgugagaaccccagUGCCCAGGCUGUGCUGUGCUCUGGGggcacgcucagcucuuccccuggcacacagccugggagcagggaguccucgccucuugcc
((.....))(((((.(((((.((.((((((((((...(((((..(((((...((...))...))))).))))))))))))))).)).))).)).)))))........

Structure

ggaccugcc     a  -   a  G          GCU     CU     cac  u 
         gugag ac ccc gU CCCAGGCUGU   GUGCU  GGGgg   gc  
         ||||| || ||| || ||||||||||   |||||  |||||   || c
         cgcuc ug ggg cg ggguccgaca   cacgg  ccccu   cg  
-ccguucuc     c  a   a  a          ---     -u     ucu  a 

Annotation confidence Low

Genome context

chr21: 1725944-1726050 [-]

Mature gga-miR-1635

• Accession: MIMAT0007508
• Description: Gallus gallus gga-miR-1635 mature miRNA
• Sequence: 23 - UGCCCAGGCUGUGCUGUGCUCUGGG - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964