Stem-loop gga-mir-1736

Accession

MI0007475

Description

Gallus gallus gga-mir-1736 precursor miRNA

Literature search

2 open access papers mention gga-mir-1736
(6 sentences)

Sequence

35 reads, 1 reads per million, 4 experiments

gaugacacaugagguugAGGGCAAUUCCUGAUAGGUGCUgagcaccaucuagcugcaaagucAGCACCUUCGGAACUGUCCUCAaccuugucugagauc
(((..((.(((((((((((((((.((((.((.((((((((((((.(.....).)))....))))))))))))))).))))))))))))))).))..)))

Structure

   ga  c               A    U  U         ----   c a 
gau  ca augagguugAGGGCA UUCC GA AGGUGCUga    gca c u
|||  || ||||||||||||||| |||| || |||||||||    ||| | c
cua  gu uguuccaACUCCUGU AAGG CU UCCACGAcu    cgu g u
   ga  c               C    -  -         gaaa   c a 

Annotation confidence Not enough data

Genome context

chr1: 139198640-139198738 [-]

Mature gga-miR-1736-5p

• Accession: MIMAT0007638
• Description: Gallus gallus gga-miR-1736-5p mature miRNA
• Sequence: 18 - AGGGCAAUUCCUGAUAGGUGCU - 39
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1736-3p

• Accession: MIMAT0007639
• Description: Gallus gallus gga-miR-1736-3p mature miRNA
• Sequence: 63 - AGCACCUUCGGAACUGUCCUCA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964