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miRBase |
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Stem-loop sequence gga-mir-16c |
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Accession | MI0007563 (change log) | |||||
Description | Gallus gallus miR-16c stem-loop | |||||
Gene family | MIPF0000006; mir-15 | |||||
Literature search |
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23 open access papers mention gga-mir-16c | |||||
Stem-loop |
cu cgua ---u g a 5' gcu agcagca aauacuggag g ggg u ||| ||||||| |||||||||| | ||| 3' uga ucgucgu uuaugaccuc u ucc c uu uacg ucgu g g |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence gga-miR-16c-5p |
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Accession | MIMAT0007739 |
Sequence |
5 - uagcagcacguaaauacuggag - 26 |
Deep sequencing | 218029 reads, 5 experiments |
Evidence | experimental; Illumina [1,3], Northern [2] |
Predicted targets |
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Mature sequence gga-miR-16c-3p |
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Accession | MIMAT0026786 |
Sequence |
48 - ccaguauugcauugcugcuuua - 69 |
Deep sequencing | 4 reads, 2 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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References |
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1 |
PMID:18469162
"A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach"
Genome Res. 18:957-964(2008).
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2 |
PMID:18511220
"Identification of novel chicken microRNAs and analysis of their genomic organization"
Gene. 418:34-40(2008).
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3 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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