Stem-loop cfa-let-7a-1

Accession

MI0007989

Description

Canis familiaris cfa-let-7a-1 precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

UGAGGUAGUAGGUUGUAUAGUUuggggcucugcccugcucuggguaacuauacaaucuacugucuuucc
.(((((((((((((((((((((((((((........))))))...)))))))))))))))))))))...

Structure

--U                     ---      ucu 
   GAGGUAGUAGGUUGUAUAGUU   uggggc   g
   |||||||||||||||||||||   ||||||    
   uucugucaucuaacauaucaa   gucucg   c
ccu                     ugg      ucc 

Annotation confidence Not enough data

Genome context

chr10: 20034319-20034387 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-let-7a-1

Mature cfa-let-7a

• Accession: MIMAT0006594
• Description: Canis familiaris cfa-let-7a mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: not_experimental

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415