miRBase entry: cfa-mir-101-2

Stem-loop cfa-mir-101-2


Accession
MI0007995
Description
Canis familiaris cfa-mir-101-2 precursor miRNA
Gene family
MIPF0000046; mir-101


Sequence

gguuaucaugguaccgaugcuguauaucugaaaggUACAGUACUGUGAUAACUGA
((((((((((((((.(.((((............))))).))))))))))))))..

Structure
--              c a    guaua 
  gguuaucaugguac g ugcu     u
  |||||||||||||| | ||||      
  UCAAUAGUGUCAUG C AUgg     c
AG              A -    aaagu 


Annotation confidence Not enough data
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Genome context
chr1: 93194328-93194382 [+]

Database links

Mature cfa-miR-101

Accession MIMAT0006600
Description Canis familiaris cfa-miR-101 mature miRNA
Sequence 36 - UACAGUACUGUGAUAACUGA - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415