Stem-loop cfa-mir-23b

Accession

MI0008008

Description

Canis familiaris cfa-mir-23b precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

guuccuggcaugcugauuugugacuuaagauuaaaAUCACAUUGCCAGGGAUUA
((((((((((((.((((((..............)))))))).))))))))))..

Structure

--          -  c      gugacu 
  guuccuggca ug ugauuu      u
  |||||||||| || ||||||       
  UAGGGACCGU AC ACUAaa      a
AU          U  -      auuaga 

Annotation confidence Not enough data

Genome context

chr1: 71678353-71678406 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cfa-mir-23b

Mature cfa-miR-23b

• Accession: MIMAT0006612
• Description: Canis familiaris cfa-miR-23b mature miRNA
• Sequence: 36 - AUCACAUUGCCAGGGAUUA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415