Stem-loop cfa-mir-335

Accession

MI0008020

Description

Canis familiaris cfa-mir-335 precursor miRNA

Gene family

MIPF0000196; mir-335

Sequence

UCAAGAGCAAUAACGAAAAAUGUuugucauaaaccguuuuucauuauugcuccugacc
(((.(((((((((.((((((((.((......)).)))))))).))))))))).)))..

Structure

--   A         C        U  gu 
  UCA GAGCAAUAA GAAAAAUG uu  c
  ||| ||||||||| |||||||| ||   
  agu cucguuauu cuuuuugc aa  a
cc   c         a        c  au 

Annotation confidence Not enough data

Genome context

chr14: 6444861-6444918 [-]

Mature cfa-miR-335

• Accession: MIMAT0006624
• Description: Canis familiaris cfa-miR-335 mature miRNA
• Sequence: 1 - UCAAGAGCAAUAACGAAAAAUGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415