Stem-loop cfa-mir-29b-1

Accession

MI0008021

Description

Canis familiaris cfa-mir-29b-1 precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

agcugguuucauauggugguuuagauuuaaauagugauugucUAGCACCAUUUGAAAUCAGUGUU
.((((((((((.((((((..((((((.............)))))))))))).))))))))))...

Structure

--a          u      gu      uuaaa 
   gcugguuuca auggug  uuagau     u
   |||||||||| ||||||  ||||||     a
   UGACUAAAGU UACCAC  GAUcug     g
UUG          U      --      uuagu 

Annotation confidence Not enough data

Genome context

chr14: 6184457-6184521 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-29b-1

Mature cfa-miR-29b

• Accession: MIMAT0006625
• Description: Canis familiaris cfa-miR-29b mature miRNA
• Sequence: 43 - UAGCACCAUUUGAAAUCAGUGUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415