Stem-loop cfa-mir-139

Accession

MI0008045

Description

Canis familiaris cfa-mir-139 precursor miRNA

Gene family

MIPF0000117; mir-139

Sequence

cuacagugcacgugucuccaguguggcuccgaggcUGGAGACGCGGCCCUGUUGGAA
((((((.((.((((((((((((.(.(...).).)))))))))))))).))).)))..

Structure

--   -   u  a            g g c 
  cua cag gc cgugucuccagu u g  
  ||| ||| || |||||||||||| | | u
  GGU GUC CG GCGCAGAGGUcg a c  
AA   U   C  -            g g c 

Annotation confidence Not enough data

Genome context

chr21: 25597025-25597081 [+]

Mature cfa-miR-139

• Accession: MIMAT0006645
• Description: Canis familiaris cfa-miR-139 mature miRNA
• Sequence: 36 - UGGAGACGCGGCCCUGUUGGAA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415