Stem-loop cfa-mir-148b

Accession

MI0008069

Description

Canis familiaris cfa-mir-148b precursor miRNA

Gene family

MIPF0000056; mir-148

Sequence

gaaguucuguuauacacucaggcuguggcucucugaaagUCAGUGCAUCACAGAACUUUGU
((((((((((.((.((((..((((.............)))))))).)).))))))))))..

Structure

--          u  a    ca    guggc 
  gaaguucugu au cacu  ggcu     u
  |||||||||| || ||||  ||||     c
  UUUCAAGACA UA GUGA  CUga     u
UG          C  C    --    aaguc 

Annotation confidence Not enough data

Genome context

chr27: 975146-975206 [-]

Mature cfa-miR-148b

• Accession: MIMAT0006663
• Description: Canis familiaris cfa-miR-148b mature miRNA
• Sequence: 40 - UCAGUGCAUCACAGAACUUUGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415