Stem-loop cfa-mir-378

Accession

MI0008093

Description

Canis familiaris cfa-mir-378 precursor miRNA

Gene family

MIPF0000168; mir-378

Sequence

cuccugacuccagguccuguguguuaccucgaaauagcACUGGACUUGGAGUCAGAAGGC
((.((((((((((((((.((((..(........)..)))).)))))))))))))).))..

Structure

--  c              u    gu acc 
  cu cugacuccaggucc gugu  u   u
  || |||||||||||||| ||||  |    
  GA GACUGAGGUUCAGG CAcg  a   c
CG  A              U    au aag 

Annotation confidence Not enough data

Genome context

chr4: 59276347-59276406 [-]

Mature cfa-miR-378

• Accession: MIMAT0006683
• Description: Canis familiaris cfa-miR-378 mature miRNA
• Sequence: 39 - ACUGGACUUGGAGUCAGAAGGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415