Stem-loop cfa-mir-125b-1

Accession

MI0008103

Description

Canis familiaris cfa-mir-125b-1 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

UCCCUGAGACCCUAACUUGUGAuguuuaccguuuaaauccacggguuaggcucuugggagc
((((.((((.(((((((((((..(((((.....))))).))))))))))).))))))))..

Structure

--    U    C           Au     c 
  UCCC GAGA CCUAACUUGUG  guuua c
  |||| |||| |||||||||||  ||||| g
  aggg uucu ggauugggcac  uaaau u
cg    -    c           -c     u 

Annotation confidence Not enough data

Genome context

chr5: 12097672-12097732 [+]

Mature cfa-miR-125b

• Accession: MIMAT0006670
• Description: Canis familiaris cfa-miR-125b mature miRNA
• Sequence: 1 - UCCCUGAGACCCUAACUUGUGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415