Stem-loop cfa-mir-345

Accession

MI0008129

Description

Canis familiaris cfa-mir-345 precursor miRNA

Gene family

MIPF0000189; mir-345

Sequence

ugcugacucuuaguccagugcucgugauggcuggugggcCCUGAACUAGGGGUCUGGAGG
(.(.((((((((((.(((.((((((........)))))).))).)))))))))).).)..

Structure

-- g u          c   u      gau 
  u c gacucuuagu cag gcucgu   g
  | | |||||||||| ||| ||||||    
  A G CUGGGGAUCA GUC cgggug   g
GG G U          A   C      guc 

Annotation confidence Not enough data

Genome context

chr8: 68592447-68592506 [+]

Mature cfa-miR-345

• Accession: MIMAT0006710
• Description: Canis familiaris cfa-miR-345 mature miRNA
• Sequence: 40 - CCUGAACUAGGGGUCUGGAGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415