Stem-loop cfa-mir-199-3

Accession

MI0008151

Description

Canis familiaris cfa-mir-199-3 precursor miRNA

Gene family

MIPF0000040; mir-199

Sequence

ccaguguuuagacuaucuguucaggacucccaaauuguACAGUAGUCUGCACAUUGGUU
(((((((.(((((((.((((.(((..........))).))))))))))).)))))))..

Structure

--       u       u    u   gacu 
  ccagugu uagacua cugu cag    c
  ||||||| ||||||| |||| |||     
  GGUUACA GUCUGAU GACA guu    c
UU       C       -    u   aaac 

Annotation confidence Not enough data

Genome context

chr9: 55262354-55262412 [+]

Mature cfa-miR-199

• Accession: MIMAT0006642
• Description: Canis familiaris cfa-miR-199 mature miRNA
• Sequence: 39 - ACAGUAGUCUGCACAUUGGUU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415