miRBase entry: cfa-mir-532

Stem-loop cfa-mir-532

Accession

MI0008184

Description

Canis familiaris cfa-mir-532 precursor miRNA

Gene family

MIPF0000113; mir-188

Sequence

CAUGCCUUGAGUGUAGGACCGUugguaucuuaauuacccucccacacccaaggcuugca
((.((((((.((((.(((.....((((.......)))).))).)))).)))))).))..

Structure

--  U      A    A   CCGUu    uc 
  CA GCCUUG GUGU GGA     ggua  u
  || |||||| |||| |||     ||||  u
  gu cggaac caca ccu     ccau  a
ac  u      c    c   ----c    ua

Annotation confidence Not enough data

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Genome context

chrX: 42774680-42774738 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cfa-mir-532

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-532

Accession	MIMAT0006758
Description	Canis familiaris cfa-miR-532 mature miRNA
Sequence	1 - CAUGCCUUGAGUGUAGGACCGU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415