Stem-loop cfa-mir-660

Accession

MI0008186

Description

Canis familiaris cfa-mir-660 precursor miRNA

Gene family

MIPF0000113; mir-188

Sequence

UACCCAUUGCAUAUCGGAGUUGugaauucucaaagcaccuccugugugcauggauuaca
...((((.((((((.((((.(((...........))).)))).))))))))))......

Structure

---UAC    U      C    U   gaau 
      CCAU GCAUAU GGAG UGu    u
      |||| |||||| |||| |||    c
      ggua cgugug ccuc acg    u
acauua    -      u    c   aaac 

Annotation confidence Not enough data

Genome context

chrX: 42783965-42784023 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-660

Mature cfa-miR-660

• Accession: MIMAT0006760
• Description: Canis familiaris cfa-miR-660 mature miRNA
• Sequence: 1 - UACCCAUUGCAUAUCGGAGUUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415