Stem-loop sequence hsa-mir-320d-1

Accession

MI0008190 (change log)

Symbol

HGNC:MIR320D1

Description

Homo sapiens miR-320d-1 stem-loop

Gene family

MIPF0000163; mir-320

Literature search

136 open access papers mention hsa-mir-320d-1
(419 sentences)

Stem-loop

   --aaaauguuggc       u       c   c  a 
5'              cuucucg cccaguu uuc ca a
                ||||||| ||||||| ||| ||  
3'              ggagagu gggucga aag gu g
   aaaaagaaaagua       u       a   a  u 

Deep sequencing

1467436 reads, 4.53e+03 reads per million, 156 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr13: 40727816-40727887 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR320D-1
• EntrezGene:MIR320D1
• HGNC:MIR320D1
• RNAcentral:URS000075B796_9606
• miRBase Tracker:MI0008190

Mature sequence hsa-miR-320d

• Accession: MIMAT0006764
• Sequence: 42 - aaaagcuggguugagagga - 60
• Deep sequencing: 2578943 reads, 156 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000010C72_9606
• Predicted targets:
  • TargetMiner:hsa-miR-320d
  • TargetScanVert:hsa-miR-320d
  • miRDB:hsa-miR-320d
  • microrna.org:hsa-miR-320d

References

1. PMID:18392026 "Discovering microRNAs from deep sequencing data using miRDeep" Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N Nat Biotechnol. 26:407-415(2008).