Stem-loop osa-MIR1861i

Accession

MI0008255

Description

Oryza sativa osa-MIR1861i precursor miRNA

Literature search

8 open access papers mention osa-MIR1861i
(46 sentences)

Sequence

221137 reads, 989.0 reads per million, 136 experiments

ggccCGAUCUUGAGGCAGGAACUGAGuaguuggugaacucgcucuauguuguucguucacuugcuacaCGGUUCCUGUCCCAAGAUCGAGuc
(((.((((((((.(((((((((((.(((((.(((((((..((........))..))))))).))))).))))))))))).)))))))).)))

Structure

   c        A           A     u       uc  ucu 
ggc CGAUCUUG GGCAGGAACUG Guagu ggugaac  gc   a
||| |||||||| ||||||||||| ||||| |||||||  ||    
cuG GCUAGAAC CUGUCCUUGGC caucg ucacuug  ug   u
   A        C           a     u       cu  uug 

Annotation confidence High

Genome context

6: 14949509-14949600 [+]

Mature osa-miR1861i-5p

• Accession: MIMAT0007804
• Description: Oryza sativa osa-miR1861i-5p mature miRNA
• Sequence: 5 - CGAUCUUGAGGCAGGAACUGAG - 26
• Evidence: experimental ; 454 [1]

Mature osa-miR1861i-3p

• Accession: MIMAT0056060
• Description: Oryza sativa osa-miR1861i-3p mature miRNA
• Sequence: 69 - CGGUUCCUGUCCCAAGAUCGAG - 90
• Evidence: experimental ; unknown

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465