miRBase entry: osa-MIR1861i

Stem-loop osa-MIR1861i


Accession
MI0008255
Description
Oryza sativa osa-MIR1861i precursor miRNA
Gene family
MIPF0000567; MIR1861

Literature search
8 open access papers mention osa-MIR1861i
(47 sentences)

Sequence

100 reads, 73 reads per million, 2 experiments
ggccCGAUCUUGAGGCAGGAACUGAGuaguuggugaacucgcucuauguuguucguucacuugcuacacgguuccugucccaagaucgaguc
(((.((((((((.(((((((((((.(((((.(((((((..((........))..))))))).))))).))))))))))).)))))))).)))

Structure
   c        A           A     u       uc  ucu 
ggc CGAUCUUG GGCAGGAACUG Guagu ggugaac  gc   a
||| |||||||| ||||||||||| ||||| |||||||  ||    
cug gcuagaac cuguccuuggc caucg ucacuug  ug   u
   a        c           a     u       cu  uug 


Annotation confidence Not enough data
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Genome context
Chr6: 14949509-14949600 [+]

Database links

Mature osa-miR1861i

Accession MIMAT0007804
Description Oryza sativa osa-miR1861i mature miRNA
Sequence 5 - CGAUCUUGAGGCAGGAACUGAG - 26
Evidence experimental
454 [1]
Database links

References

  1. PubMed ID: 18687877
    A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
    "Genome Res (2008) 18:1456-1465