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A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains |
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|---|---|
| PubMed ID | 18687877 |
| Authors | "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C" |
| Journal | "Genome Res |
| Volume | 18 |
| Pages | 1456-1465 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| osa-MIR529b | MI0005804 | 306 | Chr4 | 15883024 | 15883161 | + | - |
| osa-MIR1423 | MI0006963 | 587 | Chr4 | 19715117 | 19715252 | + | Low |
| osa-MIR1428a | MI0006968 | 0 | Chr1 | 13160777 | 13160896 | + | - |
| osa-MIR531b | MI0008222 | None | Chr1 | 833931 | 833999 | - | - |
| osa-MIR1846d | MI0008223 | 8 | Chr1 | 39637065 | 39637180 | + | - |
| osa-MIR1847 | MI0008224 | 0 | Chr1 | 20332878 | 20332987 | + | - |
| osa-MIR1848 | MI0008225 | 3 | Chr4 | 18131807 | 18131869 | + | - |
| osa-MIR1849 | MI0008226 | 58 | Chr4 | 22224813 | 22224902 | + | - |
| osa-MIR1850 | MI0008227 | 379 | Chr5 | 26275207 | 26275339 | - | - |
| osa-MIR1851 | MI0008228 | 26 | Chr5 | 26049315 | 26049785 | + | - |
| osa-MIR1852 | MI0008229 | None | Chr5 | 20761025 | 20761159 | + | - |
| osa-MIR1853 | MI0008230 | 1 | Chr8 | 3689091 | 3689179 | - | - |
| osa-MIR1854 | MI0008231 | 3 | Chr8 | 7858365 | 7858472 | - | - |
| osa-MIR1855 | MI0008232 | None | Chr11 | 21708971 | 21709080 | + | - |
| osa-MIR1856 | MI0008233 | 2 | Chr11 | 10376148 | 10376296 | - | - |
| osa-MIR1857 | MI0008234 | 25 | Chr11 | 2733902 | 2734031 | + | - |
| osa-MIR1428b | MI0008235 | 2 | Chr1 | 25390346 | 25390469 | + | - |
| osa-MIR1428c | MI0008237 | 2 | Chr2 | 2535020 | 2535161 | + | - |
| osa-MIR1428d | MI0008238 | 2 | Chr3 | 23077268 | 23077391 | + | - |
| osa-MIR1428e | MI0008239 | 5 | Chr3 | 23076870 | 23076979 | + | - |
| osa-MIR1858a | MI0008240 | 0 | Chr9 | 13536611 | 13536810 | + | - |
| osa-MIR1858b | MI0008241 | 0 | Chr9 | 13194040 | 13194233 | + | - |
| osa-MIR1846a | MI0008242 | 1 | Chr10 | 529274 | 529385 | + | - |
| osa-MIR1846b | MI0008243 | 1 | Chr11 | 27715822 | 27715933 | - | - |
| osa-MIR1859 | MI0008244 | 1 | Chr1 | 673278 | 673374 | - | - |
| osa-MIR1860 | MI0008245 | 47 | Chr1 | 934420 | 934567 | - | - |
| osa-MIR1861a | MI0008247 | 22 | Chr1 | 15049772 | 15049900 | + | - |
| osa-MIR1861b | MI0008248 | 73 | Chr2 | 20715962 | 20716079 | + | - |
| osa-MIR1861c | MI0008249 | 1 | Chr2 | 20716174 | 20716280 | + | - |
| osa-MIR1861d | MI0008250 | 8 | Chr4 | 6536337 | 6536454 | + | - |
| osa-MIR1861e | MI0008251 | 9 | Chr4 | 6536556 | 6536647 | + | - |
| osa-MIR1861f | MI0008252 | 73 | Chr5 | 18668398 | 18668513 | + | - |
| osa-MIR1861g | MI0008253 | 1 | Chr5 | 18668611 | 18668717 | + | - |
| osa-MIR1861h | MI0008254 | 58 | Chr6 | 27238190 | 27238293 | - | - |
| osa-MIR1861i | MI0008255 | 73 | Chr6 | 14949509 | 14949600 | + | - |
| osa-MIR1861j | MI0008256 | 58 | Chr8 | 15132727 | 15132836 | - | - |
| osa-MIR1861k | MI0008257 | 9 | Chr8 | 15132529 | 15132620 | - | - |
| osa-MIR1861l | MI0008258 | 74 | Chr9 | 13532426 | 13532554 | + | - |
| osa-MIR1861m | MI0008259 | 7 | Chr9 | 13532649 | 13532744 | + | - |
| osa-MIR1861n | MI0008260 | 3 | Chr12 | 16586544 | 16586672 | - | - |
| osa-MIR1862a | MI0008261 | 108 | Chr1 | 26192308 | 26192395 | + | - |
| osa-MIR1862b | MI0008262 | 113 | Chr8 | 8341200 | 8341398 | - | - |
| osa-MIR1862c | MI0008263 | 78 | Chr10 | 16093884 | 16093972 | + | - |
| osa-MIR1863a | MI0008264 | 310 | Chr2 | 8521746 | 8522119 | + | - |
| osa-MIR1864 | MI0008265 | 57 | Chr2 | 14949073 | 14949328 | - | - |
| osa-MIR1865 | MI0008266 | 30 | Chr3 | 34000594 | 34000737 | + | - |
| osa-MIR1866 | MI0008267 | None | Chr3 | 6510870 | 6510954 | + | - |
| osa-MIR1868 | MI0008270 | 517 | Chr4 | 19715448 | 19715616 | + | - |
| osa-MIR812f | MI0008271 | 93 | Chr4 | 13243503 | 13243681 | + | - |
| osa-MIR1869 | MI0008272 | 1 | Chr4 | 21644852 | 21644989 | + | - |
| osa-MIR1870 | MI0008273 | 2264 | Chr6 | 21164755 | 21164963 | + | - |
| osa-MIR1871 | MI0008274 | 135 | Chr6 | 13330464 | 13330598 | + | - |
| osa-MIR1872 | MI0008275 | 34 | Chr6 | 4923862 | 4923939 | - | - |
| osa-MIR1873 | MI0008276 | 62 | Chr7 | 12755913 | 12756109 | + | - |
| osa-MIR1874 | MI0008277 | 3 | Chr8 | 8702798 | 8702948 | - | - |
| osa-MIR1875 | MI0008278 | 46 | Chr9 | 17567947 | 17568198 | - | - |
| osa-MIR1862d | MI0008279 | 2670 | Chr10 | 4833611 | 4833760 | + | - |
| osa-MIR1876 | MI0008280 | 169 | Chr10 | 4833365 | 4833521 | + | - |
| osa-MIR1862e | MI0008282 | 1340 | Chr11 | 2523232 | 2523324 | + | - |
| osa-MIR1877 | MI0008283 | 3 | Chr9 | 21043873 | 21044133 | + | - |
| osa-MIR1878 | MI0008284 | 49 | Chr9 | 16555509 | 16555608 | + | - |
| osa-MIR1879 | MI0008285 | 190 | Chr10 | 5635320 | 5635469 | + | - |
| osa-MIR1880 | MI0008286 | 25 | Chr11 | 13959877 | 13960005 | + | - |
| osa-MIR1881 | MI0008287 | 27 | Chr12 | 5725922 | 5726259 | + | - |
| osa-MIR1882a | MI0008288 | 0 | Chr3 | 18923858 | 18924016 | - | - |
| osa-MIR1882b | MI0008289 | 0 | None | None | - | ||
| osa-MIR1882c | MI0008290 | 0 | Chr7 | 9122411 | 9122540 | + | - |
| osa-MIR1882d | MI0008291 | 0 | Chr8 | 18739319 | 18739478 | - | - |
| osa-MIR1882e | MI0008292 | 0 | Chr10 | 10320904 | 10321044 | - | - |
| osa-MIR1882f | MI0008293 | 0 | Chr11 | 11073482 | 11073641 | + | - |
| osa-MIR1882g | MI0008294 | 1 | Chr11 | 20828609 | 20828766 | + | - |
| osa-MIR1882h | MI0008295 | None | Chr12 | 21511519 | 21511711 | + | - |
| osa-MIR812g | MI0008296 | 342 | Chr3 | 5230013 | 5230254 | + | - |
| osa-MIR812h | MI0008297 | 311 | Chr3 | 1164921 | 1165107 | - | - |
| osa-MIR812i | MI0008298 | 290 | Chr7 | 22152329 | 22152570 | + | - |
| osa-MIR812j | MI0008299 | 400 | Chr8 | 19806333 | 19806629 | + | - |
| osa-MIR1883a | MI0008300 | 187 | Chr11 | 13523520 | 13523637 | + | - |
| osa-MIR1883b | MI0008301 | 83 | Chr11 | 9367993 | 9368128 | - | - |
| osa-MIR1846c | MI0010321 | 1 | Chr12 | 270780 | 270865 | + | - |
| osa-MIR1861o | MI0026006 | 22 | ChrUn | 521043 | 521171 | + | - |