Stem-loop osa-MIR1866

Accession

MI0008267

Description

Oryza sativa osa-MIR1866 precursor miRNA

Literature search

1 open access papers mention osa-MIR1866
(1 sentences)

Sequence

401864 reads, 6088.0 reads per million, 88 experiments

cuuuugcacgGAGGGAUUUUGCGGGAAUUUCACGGgaauugaguugauuccUGAAAUUCCUGUAAAAUUCuuguguuccaaagga
((((((.(((.(((((((((((((((((((((..((((((.....))))))))))))))))))))))))))).)))..)))))).

Structure

-      -c   G                     CG      g 
 cuuuug  acg AGGGAUUUUGCGGGAAUUUCA  Ggaauu a
 ||||||  ||| |||||||||||||||||||||  |||||| g
 ggaaac  ugu uuCUUAAAAUGUCCUUAAAGU  ccuuag u
a      cu   g                     --      u 

Annotation confidence Medium

Genome context

3: 6510870-6510954 [+]

Mature osa-miR1866-5p

• Accession: MIMAT0007817
• Description: Oryza sativa osa-miR1866-5p mature miRNA
• Sequence: 11 - GAGGGAUUUUGCGGGAAUUUCACGG - 35
• Evidence: experimental ; 454 [1]

Mature osa-miR1866-3p

• Accession: MIMAT0009212
• Description: Oryza sativa osa-miR1866-3p mature miRNA
• Sequence: 52 - UGAAAUUCCUGUAAAAUUC - 70
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465


2. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930