Stem-loop osa-MIR1847

Accession

MI0008224

Description

Oryza sativa osa-MIR1847 precursor miRNA

Literature search

6 open access papers mention osa-MIR1847
(6 sentences)

Sequence

12304 reads, 64.0 reads per million, 142 experiments

agacucccuaacUUUGUGCAGUUUGCAGUUGUGgcacugacauaugggccagacacauuuggcccacauguuagugccaCAACUGCAAACUACAUAAAGUcaggggaucu
(((.(((((.((((((((.((((((((((((((((((((((((.(((((((((....))))))))).)))))))))))))))))))))))).)))))))).))))).)))

Structure

   c     a        C                        a         c 
aga ucccu acUUUGUG AGUUUGCAGUUGUGgcacugacau ugggccaga a
||| ||||| |||||||| |||||||||||||||||||||||| |||||||||  
ucu gggga UGAAAUAC UCAAACGUCAACaccgugauugua acccgguuu c
   a     c        A                        c         a 

Annotation confidence High

Genome context

1: 20332878-20332987 [+]

Mature osa-miR1847-5p

• Accession: MIMAT0007766
• Description: Oryza sativa osa-miR1847-5p mature miRNA
• Sequence: 13 - UUUGUGCAGUUUGCAGUUGUG - 33
• Evidence: experimental ; 454 [1]

Mature osa-miR1847-3p

• Accession: MIMAT0007767
• Description: Oryza sativa osa-miR1847-3p mature miRNA
• Sequence: 80 - CAACUGCAAACUACAUAAAGU - 100
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465