Stem-loop osa-MIR1847

Accession

MI0008224

Description

Oryza sativa osa-MIR1847 precursor miRNA

Literature search

5 open access papers mention osa-MIR1847
(5 sentences)

Sequence

4 reads, 0 reads per million, 1 experiments

agacucccuaacuuugUGCAGUUUGCAGUUGUGGCACugacauaugggccagacacauuUGGCCCACAUGUUAGUGCCACAACugcaaacuacauaaagucaggggaucu
(((.(((((.((((((((.((((((((((((((((((((((((.(((((((((....))))))))).)))))))))))))))))))))))).)))))))).))))).)))

Structure

   c     a        C                        a         c 
aga ucccu acuuugUG AGUUUGCAGUUGUGGCACugacau ugggccaga a
||| ||||| |||||||| |||||||||||||||||||||||| |||||||||  
ucu gggga ugaaauac ucaaacguCAACACCGUGAUUGUA ACCCGGUuu c
   a     c        a                        C         a 

Annotation confidence Not enough data

Genome context

Chr1: 20332878-20332987 [+]

Mature osa-miR1847.1

• Accession: MIMAT0007766
• Description: Oryza sativa osa-miR1847.1 mature miRNA
• Sequence: 17 - UGCAGUUUGCAGUUGUGGCAC - 37
• Evidence: experimental ; 454 [1]

Mature osa-miR1847.2

• Accession: MIMAT0007767
• Description: Oryza sativa osa-miR1847.2 mature miRNA
• Sequence: 60 - UGGCCCACAUGUUAGUGCCACAAC - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465