Stem-loop osa-MIR812h

Accession

MI0008297

Description

Oryza sativa osa-MIR812h precursor miRNA

Literature search

10 open access papers mention osa-MIR812h
(16 sentences)

Sequence

112017 reads, 482.0 reads per million, 142 experiments

uUGUACUCCCUCCGUCCCAuuuuaagugcaaucaugaguuucgcccaacuuuaaucaucuguuuuauuugaacuuuuuauaaauaguauuuuuauuguuaugagauuauaaaauuuaaauaaGACGGAUGAUUAAAGUUGGACACGaaaacucauggcuacacuuacaaugaaauggagggguacua
..((((.((((((((..((((.((((((...((((((((((((.((((((((((((((((((((((((((((..((((((((((((((....)))))).......))))))))))))))))))))))))))))))))))))...)).))))))))))...)))))).))))..))))))))))))..

Structure

uU    U        CC    u      caa          -  --c                            cu        -------      u 
  GUAC CCCUCCGU  CAuu uaagug   ucaugaguuu cg   ccaacuuuaaucaucuguuuuauuugaa  uuuuauaa       auagua u
  |||| ||||||||  |||| ||||||   |||||||||| ||   ||||||||||||||||||||||||||||  ||||||||       ||||||  
  caug gggaggua  guaa auucac   gguacucaaa GC   GGUUGAAAUUAGUAGGCAGaauaaauuu  aaaauauu       uguuau u
au    -        aa    c      auc          a  ACA                            --        agaguau      u 

Annotation confidence Low

Genome context

3: 1164921-1165107 [-]

Mature osa-miR812h-3p

• Accession: MIMAT0007848
• Description: Oryza sativa osa-miR812h-3p mature miRNA
• Sequence: 123 - GACGGAUGAUUAAAGUUGGACACG - 146
• Evidence: experimental ; 454 [1]

Mature osa-miR812h-3p

• Accession: MIMAT0056094
• Description: Oryza sativa osa-miR812h-3p mature miRNA
• Sequence: 2 - UGUACUCCCUCCGUCCCA - 19
• Evidence: experimental ; unknown

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465