Dead hairpin entry

Stem-loop osa-MIR812h

Accession

MI0008297

Description

Oryza sativa osa-MIR812h precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

10 open access papers mention osa-MIR812h
(16 sentences)

Sequence

112017 reads, 482.0 reads per million, 142 experiments

uUGUACUCCCUCCGUCCCAuuuuaagugcaaucaugaguuucgcccaacuuuaaucaucuguuuuauuugaacuuuuuauaaauaguauuuuuauuguuaugagauuauaaaauuuaaauaaGACGGAUGAUUAAAGUUGGACACGaaaacucauggcuacacuuacaaugaaauggagggguacua
..((((.((((((((..((((.((((((...((((((((((((.((((((((((((((((((((((((((((..((((((((((((((....)))))).......))))))))))))))))))))))))))))))))))))...)).))))))))))...)))))).))))..))))))))))))..

Structure

uU    U        CC    u      caa          -  --c                            cu        -------      u 
  GUAC CCCUCCGU  CAuu uaagug   ucaugaguuu cg   ccaacuuuaaucaucuguuuuauuugaa  uuuuauaa       auagua u
  |||| ||||||||  |||| ||||||   |||||||||| ||   ||||||||||||||||||||||||||||  ||||||||       ||||||  
  caug gggaggua  guaa auucac   gguacucaaa GC   GGUUGAAAUUAGUAGGCAGaauaaauuu  aaaauauu       uguuau u
au    -        aa    c      auc          a  ACA                            --        agaguau      u