Stem-loop osa-MIR1849

Accession

MI0008226

Description

Oryza sativa osa-MIR1849 precursor miRNA

Literature search

2 open access papers mention osa-MIR1849
(2 sentences)

Sequence

65 reads, 45 reads per million, 2 experiments

aaauaagcuaaccuaggauaugaugggacauuaccuaucuagauucguuguacuagguaaugcccUAUCGUAUCCUAGGUUGGUUUauuu
(((((((((((((((((((((((((((.(((((((((..((.(.....).)).))))))))).)))))))))))))))))))))))))))

Structure

                           a         uc  g u 
aaauaagcuaaccuaggauaugauggg cauuaccua  ua a u
||||||||||||||||||||||||||| |||||||||  || | c
uuuaUUUGGUUGGAUCCUAUGCUAUcc guaauggau  au u g
                           c         -c  g u 

Annotation confidence Not enough data

Genome context

Chr4: 22224813-22224902 [+]

Mature osa-miR1849

• Accession: MIMAT0007769
• Description: Oryza sativa osa-miR1849 mature miRNA
• Sequence: 66 - UAUCGUAUCCUAGGUUGGUUU - 86
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 19903869
   Rice MicroRNA effector complexes and targets
   "Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y"
   "Plant Cell (2009) 21:3421-3435


2. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465