Stem-loop osa-MIR1862c

Accession

MI0008263

Description

Oryza sativa osa-MIR1862c precursor miRNA

Literature search

11 open access papers mention osa-MIR1862c
(14 sentences)

Sequence

245725 reads, 761.0 reads per million, 141 experiments

acucccuccguCCCAAAAUAAGUCAAUCCCGUACUaguauaugacacuuccuaguACGAGGUUGGUUUAUUUUGGGACGgagagaguag
((((.(((((((((((((((((((((((.((((((((.............)))))))).))))))))))))))))))))))).))))..

Structure

--    c                       C        uauau 
  acuc cuccguCCCAAAAUAAGUCAAUC CGUACUag     g
  |||| ||||||||||||||||||||||| ||||||||     a
  ugag gagGCAGGGUUUUAUUUGGUUGG GCAugauc     c
ga    a                       A        cuuca 

Annotation confidence Medium

Genome context

10: 16093884-16093972 [+]

Mature osa-miR1862c-5p

• Accession: MIMAT0056068
• Description: Oryza sativa osa-miR1862c-5p mature miRNA
• Sequence: 12 - CCCAAAAUAAGUCAAUCCCGUACU - 35
• Evidence: experimental ; unknown

Mature osa-miR1862c-3p

• Accession: MIMAT0007812
• Description: Oryza sativa osa-miR1862c-3p mature miRNA
• Sequence: 56 - ACGAGGUUGGUUUAUUUUGGGACG - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465