Stem-loop osa-MIR1882d

Accession

MI0008291

Description

Oryza sativa osa-MIR1882d precursor miRNA

Sequence

uguuaucguuaccaauauccuAGAUUGCUUUCAAGGUCAUUUCUUuaggaaaccccauucccauaaauucaguauccaaagaugguuguuguaucuaugggaauaaggguucccuaacgaaaugaucuuggacgcaaucuaggaguuugcugauaauaac
.(((((.((((.(((..(((((((((((.((((((((((((((.(((((.(((((.(((((((((.((.(((((.(((....))).))))).)).)))))))))..))))).))))).)))))))))))))).)))))))))))..))).)))).)))))

Structure

u     c    c   ua           U              U     a     -c         a  u     u   a 
 guuau guua caa  uccuAGAUUGC UUCAAGGUCAUUUC Uuagg aaccc  auucccaua au cagua cca a
 ||||| |||| |||  ||||||||||| |||||||||||||| ||||| |||||  ||||||||| || ||||| |||  
 caaua uagu guu  aggaucuaacg agguucuaguaaag aaucc uuggg  uaaggguau ua guugu ggu g
-     a    c   ug           c              c     c     aa         c  u     u   a 

Annotation confidence Not enough data

Genome context

Chr8: 18739319-18739478 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from osa-MIR1882d

Mature osa-miR1882d

• Accession: MIMAT0007842
• Description: Oryza sativa osa-miR1882d mature miRNA
• Sequence: 22 - AGAUUGCUUUCAAGGUCAUUUCUU - 45
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465