Stem-loop osa-MIR1852

Accession

MI0008229

Description

Oryza sativa osa-MIR1852 precursor miRNA

Literature search

2 open access papers mention osa-MIR1852
(2 sentences)

Sequence

reads, None reads per million, experiments

uagacuaacuaccccugcauucagaauucauauagcgauugaaaauugaacuccgugcacgguaguaguaguagucagaucuauuguuucuaaucaauugcuAUAUGGAUUCAGAAUGCAGGUguaguuuguuca
..(((.((((((.(((((((((.(((((((((((((((((((.......((((((....))).)))..((((((......)))))).......))))))))))))))))))).))))))))).)))))).)))..

Structure

ua   u      c         a                   --------------------aaauuga   -   u 
  gac aacuac ccugcauuc gaauucauauagcgauuga                           acu ccg g
  ||| |||||| ||||||||| |||||||||||||||||||                           ||| |||  
  uug uugaug GGACGUAAG CUUAGGUAUAucguuaacu                           uga ggc c
ac   u      U         A                   aaucuuuguuaucuagacugaugauga   u   a 

Annotation confidence Not enough data

Genome context

Chr5: 20761025-20761159 [+]

Mature osa-miR1852

• Accession: MIMAT0007772
• Description: Oryza sativa osa-miR1852 mature miRNA
• Sequence: 103 - AUAUGGAUUCAGAAUGCAGGU - 123
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465