Stem-loop osa-MIR1862a

Accession

MI0008261

Description

Oryza sativa osa-MIR1862a precursor miRNA

Literature search

11 open access papers mention osa-MIR1862a
(14 sentences)

Sequence

263767 reads, 782.0 reads per million, 142 experiments

guACUCCCUCCGUCCCGAAAuaaccaaaccucguaggacaugucacauccuaguACGAGGUUGGUUUAUUUUGGGACGgagggaguau
(((((((((((((((((((((((((((.((((((((((.........))))...)))))))))).)))))))))))))))))))))))

Structure

                       -    a      ---    cau 
guACUCCCUCCGUCCCGAAAuaa ccaa ccucgu   agga   g
||||||||||||||||||||||| |||| ||||||   ||||   u
uaugagggagGCAGGGUUUUAUU GGUU GGAGCA   uccu   c
                       U    -      uga    aca 

Annotation confidence Low

Genome context

1: 26192308-26192395 [+]

Mature osa-miR1862a-5p

• Accession: MIMAT0056066
• Description: Oryza sativa osa-miR1862a-5p mature miRNA
• Sequence: 3 - ACUCCCUCCGUCCCGAAA - 20
• Evidence: experimental ; unknown

Mature osa-miR1862a-3p

• Accession: MIMAT0007810
• Description: Oryza sativa osa-miR1862a-3p mature miRNA
• Sequence: 55 - ACGAGGUUGGUUUAUUUUGGGACG - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465