Stem-loop osa-MIR1861n

Accession

MI0008260

Description

Oryza sativa osa-MIR1861n precursor miRNA

Literature search

8 open access papers mention osa-MIR1861n
(46 sentences)

Sequence

84241 reads, 502.0 reads per million, 127 experiments

gcguguuguauauucuuaggccCGAUCUUGUGGCAGGAGCUGAGuagcuggugaacucgcuuuauguuguucauucacucgcuacaCGGUUCCUGUCCCAAGAUCGAGucugugaauaugcaaauguga
((((.((((((((((.(((((.((((((((.(((((((((((.(((((.((((((...((........))...)))))).))))).))))))))))).)))))))).))))).))))))))))))))..

Structure

--    g          u     c        U           A     u      cuc  uuu 
  gcgu uuguauauuc uaggc CGAUCUUG GGCAGGAGCUG Guagc ggugaa   gc   a
  |||| |||||||||| ||||| |||||||| ||||||||||| ||||| ||||||   ||    
  ugua aacguauaag gucuG GCUAGAAC CUGUCCUUGGC caucg ucacuu   ug   u
ag    -          u     A        C           a     c      acu  uug 

Annotation confidence High

Genome context

12: 16586544-16586672 [-]

Mature osa-miR1861n-5p

• Accession: MIMAT0007809
• Description: Oryza sativa osa-miR1861n-5p mature miRNA
• Sequence: 23 - CGAUCUUGUGGCAGGAGCUGAG - 44
• Evidence: experimental ; 454 [1]

Mature osa-miR1861n-3p

• Accession: MIMAT0056065
• Description: Oryza sativa osa-miR1861n-3p mature miRNA
• Sequence: 87 - CGGUUCCUGUCCCAAGAUCGAG - 108
• Evidence: experimental ; unknown

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465