miRBase entry: osa-MIR812g

Dead hairpin entry

Stem-loop osa-MIR812g


Accession
MI0008296
Description
Oryza sativa osa-MIR812g precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
11 open access papers mention osa-MIR812g
(19 sentences)

Sequence

94389 reads, 356.0 reads per million, 142 experiments
uuccgauguaaucccucuguuccauuuuaagugcagccaugguuuuacgcgcucaACUUUAAUCGUCCGUCUUAUUUAAaaaaaauuaaaaacauaagucaugaguaaaguauacuauucauauuuuauuaucucauaacaauaaaaauacuaauuauaaaaaaauuuAAAUAAGACGGAUGAUUAAAGUUGgacauggaaacucauaguuguacuuaaaaugggacgaagggaguaucauu
....((((...(((((.((((((((((((((((((((.((((((((.((.(.((((((((((((((((((((((((((((.................((.(((((((((((((.......))))))))....))))).)).((((.........)))).......)))))))))))))))))))))))))))).).))))))).))).)))))))))))))))))))).)))))....))))

Structure
uucc    -uaa     c                    c   -     a  c c                            --------aaaaauuaaaaacauaa  c     ----        ac 
    gaug    ucccu uguuccauuuuaagugcagc aug guuuu cg g ucaACUUUAAUCGUCCGUCUUAUUUAAa                         gu augag    uaaaguau  u
    ||||    ||||| |||||||||||||||||||| ||| ||||| || | ||||||||||||||||||||||||||||                         || |||||    ||||||||  a
    uuac    aggga gcaggguaaaauucauguug uac caaag gu c gGUUGAAAUUAGUAGGCAGAAUAAAuuu                         ca uacuc    auuuuaua  u
----    uaug     a                    a   u     -  a a                            aaaaaaauauuaaucauaaaaauaa  a     uauu        cu