Stem-loop osa-MIR531b

Accession

MI0008222

Description

Oryza sativa osa-MIR531b precursor miRNA

Literature search

11 open access papers mention osa-MIR531b
(18 sentences)

Sequence

136830 reads, 585.0 reads per million, 107 experiments

ccgagccuugCUCGCCGGGGCUGCGUGCCGCCAuaGCUGGUGCGCAUCCCCGUCGAGCGuugcucgacg
.(((((..((((((.(((((.((((((((((....)).)))))))).))))).))))))..)))))...

Structure

--c     cu      C     C        -  C 
   cgagc  ugCUCG CGGGG UGCGUGCC GC A
   |||||  |||||| ||||| |||||||| ||  
   gcucg  GCGAGC GCCCC ACGCGUGG CG u
gca     uu      U     U        U  a 

Annotation confidence Low

Genome context

1: 833931-833999 [-]

Mature osa-miR531b-5p

• Accession: MIMAT0007763
• Description: Oryza sativa osa-miR531b-5p mature miRNA
• Sequence: 11 - CUCGCCGGGGCUGCGUGCCGCCA - 33
• Evidence: experimental ; 454 [1]

Mature osa-miR531b-3p

• Accession: MIMAT0056039
• Description: Oryza sativa osa-miR531b-3p mature miRNA
• Sequence: 36 - GCUGGUGCGCAUCCCCGUCGAGCG - 59
• Evidence: experimental ; unknown

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465