Stem-loop osa-MIR1883a

Accession

MI0008300

Description

Oryza sativa osa-MIR1883a precursor miRNA

Literature search

4 open access papers mention osa-MIR1883a
(4 sentences)

Sequence

213016 reads, 885.0 reads per million, 142 experiments

acccgucacugguaucuagucaCCUGUGACGGGCCGAGAAUGGAACccgucaaagggacaccucugacggguUCCAUUCUCGAUCCGUCACAGGUGacuagaugccugugacggcccg
..(((((((.(((((((((((((((((((((((.((((((((((((((((((.(((....))).)))))))))))))))))).))))))))))))))))))))))).)))))))....

Structure

--ac       u                       C                  a   g 
    ccgucac gguaucuagucaCCUGUGACGGG CGAGAAUGGAACccguca agg a
    ||||||| ||||||||||||||||||||||| |||||||||||||||||| |||  
    ggcagug ccguagaucaGUGGACACUGCCU GCUCUUACCUugggcagu ucc c
gccc       u                       A                  c   a 

Annotation confidence Medium

Genome context

11: 13523520-13523637 [+]

Mature osa-miR1883a-5p

• Accession: MIMAT0007851
• Description: Oryza sativa osa-miR1883a-5p mature miRNA
• Sequence: 23 - CCUGUGACGGGCCGAGAAUGGAAC - 46
• Evidence: experimental ; 454 [1]

Mature osa-miR1883a-3p

• Accession: MIMAT0056097
• Description: Oryza sativa osa-miR1883a-3p mature miRNA
• Sequence: 73 - UCCAUUCUCGAUCCGUCACAGGUG - 96
• Evidence: experimental ; unknown

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465