Stem-loop osa-MIR1861k

Accession

MI0008257

Description

Oryza sativa osa-MIR1861k precursor miRNA

Literature search

8 open access papers mention osa-MIR1861k
(48 sentences)

Sequence

9 reads, 9 reads per million, 2 experiments

gcauauucuuaggccCGGUCUUGUGGCAAGAACUGAGuaguucguuaacucgcuacgcgguucuugucacaagaccgagucugugaauaugc
((((((((.(((((.((((((((((((((((((((.(((((..........))))).)))))))))))))))))))).))))).))))))))

Structure

        u     c                    A     ucgu 
gcauauuc uaggc CGGUCUUGUGGCAAGAACUG Guagu    u
|||||||| ||||| |||||||||||||||||||| |||||     
cguauaag gucug gccagaacacuguucuuggc caucg    a
        u     a                    g     cuca 

Annotation confidence Not enough data

Genome context

Chr8: 15132529-15132620 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from osa-MIR1861k

Mature osa-miR1861k

• Accession: MIMAT0007806
• Description: Oryza sativa osa-miR1861k mature miRNA
• Sequence: 16 - CGGUCUUGUGGCAAGAACUGAG - 37
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465