Stem-loop osa-MIR1861h

Accession

MI0008254

Description

Oryza sativa osa-MIR1861h precursor miRNA

Literature search

10 open access papers mention osa-MIR1861h
(50 sentences)

Sequence

427664 reads, 1627.0 reads per million, 140 experiments

uucuuaggccCGGUCUUGAGGCAGGAACUGAGuaguuggugaacucgcucuauguuguucguucacucgcgacaCGGUUCCUGUCCCAAGACUGAGucugugaa
.((.(((((.((((((((.(((((((((((.((.((.(((((((..((........))..))))))).)).)).))))))))))).)))))))).))))).)).

Structure

u  u     c        A           A  a  u       uc  ucu 
 uc uaggc CGGUCUUG GGCAGGAACUG Gu gu ggugaac  gc   a
 || ||||| |||||||| ||||||||||| || || |||||||  ||    
 ag gucuG GUCAGAAC CUGUCCUUGGC ca cg ucacuug  ug   u
a  u     A        C           a  g  c       cu  uug 

Annotation confidence High

Genome context

6: 27238190-27238293 [-]

Mature osa-miR1861h-5p

• Accession: MIMAT0007803
• Description: Oryza sativa osa-miR1861h-5p mature miRNA
• Sequence: 11 - CGGUCUUGAGGCAGGAACUGAG - 32
• Evidence: experimental ; 454 [1]

Mature osa-miR1861h-3p

• Accession: MIMAT0056059
• Description: Oryza sativa osa-miR1861h-3p mature miRNA
• Sequence: 75 - CGGUUCCUGUCCCAAGACUGAG - 96
• Evidence: experimental ; unknown

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465