Stem-loop osa-MIR1882a

Accession

MI0008288

Description

Oryza sativa osa-MIR1882a precursor miRNA

Sequence

34561 reads, 173.0 reads per million, 92 experiments

ucuguuaucgguaccaauauccuAGAUUGCUUUCAAGGUCAUUUCUUuauggaagcccauucccauaaauucaguauccaaagaugguuguuguaucuaaauagggguuccauaacGAAAUGAUCUUGGAUGCAAUCUAGgaguuugcugaugauaacg
..(((((((((...(((..(((((((((((.((((((((((((((.((((((((.(((.............(((((.(((....))).)))))..........))).)))))))).)))))))))))))).)))))))))))..))))))))))))...

Structure

-uc         uac   ua           U              U        g   auucccauaaauu     u   a 
   uguuaucgg   caa  uccuAGAUUGC UUCAAGGUCAUUUC Uuauggaa ccc             cagua cca a
   |||||||||   |||  ||||||||||| |||||||||||||| |||||||| |||             ||||| |||  
   auaguaguc   guu  agGAUCUAACG AGGUUCUAGUAAAG aauaccuu ggg             guugu ggu g
gca         ---   ug           U              c        g   ---auaaaucuau     u   a 

Annotation confidence High

Genome context

3: 18923858-18924016 [-]

Mature osa-miR1882a-5p

• Accession: MIMAT0007839
• Description: Oryza sativa osa-miR1882a-5p mature miRNA
• Sequence: 24 - AGAUUGCUUUCAAGGUCAUUUCUU - 47
• Evidence: experimental ; 454 [1]

Mature osa-miR1882a-3p

• Accession: MIMAT0056086
• Description: Oryza sativa osa-miR1882a-3p mature miRNA
• Sequence: 117 - GAAAUGAUCUUGGAUGCAAUCUAG - 140
• Evidence: experimental ; unknown

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465