Stem-loop osa-MIR1428c

Accession

MI0008237

Description

Oryza sativa osa-MIR1428c precursor miRNA

Literature search

5 open access papers mention osa-MIR1428c
(21 sentences)

Sequence

4 reads, 2 reads per million, 2 experiments

gcuucaguagguuagugcacuuugcgaauucgcaggcccuauccugugguaugaacugaguacgcgauaauuuauggugcauauuaggggcuuaccaUAAGAUAAUGCCAUGAAUUCGcaaaguguucaaacccacugaagu
((((((((.((((.(.((((((((((((((((..(((..((((.(((((((.(..((.(((((((.(((...))).)))..)))).))..).))))))).))))..))).)))))))))))))))).).)))).))))))))

Structure

        a    a u                ca   cc    c       u aa  g    --   g   a 
gcuucagu gguu g gcacuuugcgaauucg  ggc  uauc uguggua g  cu agua  cgc aua  
|||||||| |||| | ||||||||||||||||  |||  |||| ||||||| |  || ||||  ||| ||| u
ugaaguca ccaa c ugugaaacGCUUAAGU  CCG  AUAG AUaccau c  gg uuau  gug uau  
        c    a u                -A   UA    A       u gg  a    ac   g   u 

Annotation confidence Not enough data

Genome context

Chr2: 2535020-2535161 [+]

Mature osa-miR1428c

• Accession: MIMAT0007782
• Description: Oryza sativa osa-miR1428c mature miRNA
• Sequence: 98 - UAAGAUAAUGCCAUGAAUUCG - 118
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465