Dead hairpin entry

Stem-loop osa-MIR812i

Accession

MI0008298

Description

Oryza sativa osa-MIR812i precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

10 open access papers mention osa-MIR812i
(17 sentences)

Sequence

104033 reads, 445.0 reads per million, 142 experiments

uagaacucccuccauccaaaaauaagcguagccauaaguuuucgucUUCAACUUAGAUCAUCUGUCUUAuuugaaacuuuuuuaugauuaguauuuuuuuauuagauuguaaaacaugaauauuacuuuaugcaugacuuauauuauuuuagauuuucuaaaaaaaauaaauAAGACGGAUGAUUAAAGUUGGACAcgaaaacucagggcugcgcuuauuuugggaaugagggaguacggag
....((((((((..(((.(((((((((((((((...(((((((((.((((((((.((((((((((((((((((......((((((((((((((......)))).))))))))))((((.(((......))).))))..........(((((((...)))))))....)))))))))))))))))).)))))))).)))))))))...))))))))))))))).)))..))))))))......

Structure

--uaga        ca   a               aua         c        A                  -----------------------------------------------aaacuu          -    uu 
      acucccuc  ucc aaaauaagcguagcc   aguuuucgu UUCAACUU GAUCAUCUGUCUUAuuug                                                     uuuuaugauu agua  u
      ||||||||  ||| |||||||||||||||   ||||||||| |||||||| ||||||||||||||||||                                                     |||||||||| ||||   
      ugagggag  agg uuuuauucgcgucgg   ucaaaagcA AGGUUGAA UUAGUAGGCAGAAuaaau                                                     aaaauguuag uuau  u
gaggca        ua   g               gac         C        A                  aaaaaaaaucuuuuagauuuuauuauauucaguacguauuucauuauaaguac          a    uu