miRBase entry: osa-MIR1862a

Stem-loop osa-MIR1862a


Accession
MI0008261
Description
Oryza sativa osa-MIR1862a precursor miRNA
Gene family
MIPF0000580; MIR1862

Literature search
11 open access papers mention osa-MIR1862a
(14 sentences)

Sequence

117 reads, 108 reads per million, 2 experiments
guacucccuccgucccgaaauaaccaaaccucguaggacaugucacauccuaguACGAGGUUGGUUUAUUUUGGGACGgagggaguau
(((((((((((((((((((((((((((.((((((((((.........))))...)))))))))).)))))))))))))))))))))))

Structure
                       -    a      ---    cau 
guacucccuccgucccgaaauaa ccaa ccucgu   agga   g
||||||||||||||||||||||| |||| ||||||   ||||   u
uaugagggagGCAGGGUUUUAUU GGUU GGAGCA   uccu   c
                       U    -      uga    aca 


Annotation confidence Not enough data
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Genome context
Chr1: 26192308-26192395 [+]

Database links

Mature osa-miR1862a

Accession MIMAT0007810
Description Oryza sativa osa-miR1862a mature miRNA
Sequence 55 - ACGAGGUUGGUUUAUUUUGGGACG - 78
Evidence experimental
454 [1]
Database links

References

  1. PubMed ID: 18687877
    A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
    "Genome Res (2008) 18:1456-1465