Stem-loop osa-MIR1862c

Accession

MI0008263

Description

Oryza sativa osa-MIR1862c precursor miRNA

Gene family

MIPF0000580; MIR1862

Literature search

11 open access papers mention osa-MIR1862c
(14 sentences)

Sequence

129 reads, 78 reads per million, 2 experiments

acucccuccgucccaaaauaagucaaucccguacuaguauaugacacuuccuaguACGAGGUUGGUUUAUUUUGGGACGgagagaguag
((((.(((((((((((((((((((((((.((((((((.............)))))))).))))))))))))))))))))))).))))..

Structure

--    c                       c        uauau 
  acuc cuccgucccaaaauaagucaauc cguacuag     g
  |||| ||||||||||||||||||||||| ||||||||     a
  ugag gagGCAGGGUUUUAUUUGGUUGG GCAugauc     c
ga    a                       A        cuuca 

Annotation confidence Not enough data

Genome context

Chr10: 16093884-16093972 [+]

Mature osa-miR1862c

• Accession: MIMAT0007812
• Description: Oryza sativa osa-miR1862c mature miRNA
• Sequence: 56 - ACGAGGUUGGUUUAUUUUGGGACG - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465