Stem-loop osa-MIR1882e

Accession

MI0008292

Description

Oryza sativa osa-MIR1882e precursor miRNA

Gene family

MIPF0000571; MIR1882

Literature search

2 open access papers mention osa-MIR1882e
(2 sentences)

Sequence

ccaauauccuAGAUUGCUUUCAAGGUCAUUUCUUuagggaaccccauucccauaaauucaguauccaaagcugguugcuguaucuaugggaauaaggguucccuuacGAAAUGAUCUUGGACGUAAUCUAGgaguuugcug
.(((..(((((((((((.((((((((((((((...(((((((((.(((((((((.((.(((((.(((....))).))))).)).)))))))))..)))))))))...)))))))))))))).)))))))))))..)))...

Structure

--c   ua           U              UUu         -c         a  u     u   a 
   caa  uccuAGAUUGC UUCAAGGUCAUUUC   agggaaccc  auucccaua au cagua cca a
   |||  ||||||||||| ||||||||||||||   |||||||||  ||||||||| || ||||| |||  
   guu  agGAUCUAAUG AGGUUCUAGUAAAG   ucccuuggg  uaaggguau ua gucgu ggu g
guc   ug           C              cau         aa         c  u     u   c 

Annotation confidence Not enough data

Genome context

Chr10: 10320904-10321044 [-]

Mature osa-miR1882e-5p

• Accession: MIMAT0007843
• Description: Oryza sativa osa-miR1882e-5p mature miRNA
• Sequence: 11 - AGAUUGCUUUCAAGGUCAUUUCUU - 34
• Evidence: experimental ; 454 [1], Illumina [2]

Mature osa-miR1882e-3p

• Accession: MIMAT0015285
• Description: Oryza sativa osa-miR1882e-3p mature miRNA
• Sequence: 108 - GAAAUGAUCUUGGACGUAAUCUAG - 131
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 19903869
   Rice MicroRNA effector complexes and targets
   "Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y"
   "Plant Cell (2009) 21:3421-3435


2. PubMed ID: 18687877
   A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
   "Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C"
   "Genome Res (2008) 18:1456-1465