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miRBase |
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Stem-loop sequence sly-MIR169a |
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Accession | MI0008361 (change log) | |||||
Description | Solanum lycopersicum miR169a stem-loop | |||||
Gene family | MIPF0000037; MIR169_2 | |||||
Literature search |
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17 open access papers mention sly-MIR169a | |||||
Stem-loop |
-ua uuu a uu c g c ug c --a ug 5' ggucua agg gcauga g gaagagagu aa uug agccaagga acuugccgga c aaagu u |||||| ||| |||||| | ||||||||| || ||| ||||||||| |||||||||| | ||||| g 3' ccagau ucc uguacu c cuucucucg uu aau ucgguuuuu ugaacggccu g uuuua a ugc uau - uu u g a gu u auc cc |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence sly-miR169a |
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Accession | MIMAT0007918 |
Sequence |
41 - cagccaaggaugacuugccgg - 61 |
Evidence | experimental; 454 [1] |
References |
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1 |
PMID:18653800
"Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening"
Genome Res. 18:1602-1609(2008).
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