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Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening |
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|---|---|
| PubMed ID | 18653800 |
| Authors | "Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T" |
| Journal | "Genome Res |
| Volume | 18 |
| Pages | 1602-1609 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| sly-MIR1916 | MI0008351 | None | chr8 | 57414133 | 57414346 | + | - |
| sly-MIR1917 | MI0008352 | None | chr8 | 52099541 | 52099671 | - | - |
| sly-MIR1918 | MI0008353 | None | chr8 | 65424541 | 65424690 | - | - |
| sly-MIR1919a | MI0008354 | None | chr8 | 56612335 | 56612457 | + | - |
| sly-MIR1919b | MI0008355 | None | chr8 | 56580749 | 56580892 | + | - |
| sly-MIR1919c | MI0008356 | None | chr8 | 56567231 | 56567374 | + | - |
| sly-MIR160a | MI0008357 | None | chr5 | 65436314 | 65436442 | - | - |
| sly-MIR166a | MI0008358 | None | chr6 | 2516284 | 2516394 | - | - |
| sly-MIR166b | MI0008359 | None | chr8 | 65694593 | 65694793 | + | - |
| sly-MIR167a | MI0008360 | None | chr6 | 49339356 | 49339471 | - | - |
| sly-MIR169a | MI0008361 | None | chr7 | 4225343 | 4225491 | + | - |
| sly-MIR169b | MI0008362 | None | chr7 | 2174563 | 2174767 | + | - |
| sly-MIR169c | MI0008363 | None | chr7 | 4210774 | 4210920 | + | - |
| sly-MIR169d | MI0008364 | None | chr7 | 2171588 | 2171763 | - | - |
| sly-MIR171a | MI0008365 | None | chr2 | 46752782 | 46752903 | - | - |
| sly-MIR171b | MI0008366 | None | chr2 | 44783518 | 44783603 | - | - |
| sly-MIR171c | MI0008367 | None | chr12 | 519779 | 519899 | - | - |
| sly-MIR171d | MI0008368 | None | chr12 | 2882790 | 2882901 | + | - |
| sly-MIR395a | MI0008369 | None | chr5 | 1703152 | 1703350 | + | - |
| sly-MIR395b | MI0008370 | None | chr5 | 1713691 | 1713791 | + | - |
| sly-MIR397 | MI0008371 | None | chr7 | 66059126 | 66059241 | - | - |
| sly-MIR391 | MI0019258 | None | chr6 | 4541880 | 4541970 | + | - |