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miRBase |
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Stem-loop sequence sly-MIR171c |
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Accession | MI0008367 (change log) | ||||
Description | Solanum lycopersicum miR171c stem-loop | ||||
Gene family | MIPF0000030; MIR171_1 | ||||
Literature search |
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24 open access papers mention sly-MIR171c | ||||
Stem-loop |
--au --gaa a g c u a 5' caa ggau uacacg gauauuggugcgguucaau agaaag ag acuuaaga c ||| |||| |||||| ||||||||||||||||||| |||||| || |||||||| 3' guu ucua augugc cuauaaccgcgccgaguua uuuuuc uc ugaguuuu a gauu aaucg a g a - u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sly-miR171c |
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Accession | MIMAT0007924 |
Sequence |
22 - uauuggugcgguucaaugaga - 42 |
Evidence | experimental; 454 [1] |
References |
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1 |
PMID:18653800
"Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening"
Genome Res. 18:1602-1609(2008).
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