Stem-loop tca-mir-14

Accession

MI0008903

Description

Tribolium castaneum tca-mir-14 precursor miRNA

Gene family

MIPF0000182; mir-14

Sequence

gacuccaaugggugaacAGGGGAGCGGAUUGGACUUACUuuuuuucaaacagUCAGUCUUUUUCUCUCUCCUAUuaauccauucgau
...((.(((((((....(((((((.(((..(((((.(((.(((...))).))).)))))..))).)))))))....))))))).)).

Structure

gac  c       gaac       C   UU     U   u   u 
   uc aaugggu    AGGGGAG GGA  GGACU ACU uuu  
   || |||||||    ||||||| |||  ||||| ||| ||| u
   ag uuaccua    UCCUCUC CUU  UCUGA Uga aaa  
--u  c       auUA       U   UU     C   c   c 

Annotation confidence Not enough data

Genome context

ChLG3: 2755793-2755879 [+]

Mature tca-miR-14-3p

• Accession: MIMAT0008361
• Description: Tribolium castaneum tca-miR-14-3p mature miRNA
• Sequence: 53 - UCAGUCUUUUUCUCUCUCCUAU - 74
• Evidence: experimental ; SOLID [2]

Mature tca-miR-14-5p

• Accession: MIMAT0019105
• Description: Tribolium castaneum tca-miR-14-5p mature miRNA
• Sequence: 18 - AGGGGAGCGGAUUGGACUUACU - 39
• Evidence: experimental ; SOLID [2]

References

1. PubMed ID: 18651924
   In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)
   "Singh J, Nagaraju J"
   "Insect Mol Biol (2008) 17:427-436


2. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696