miRBase entry: bta-mir-146b

Stem-loop bta-mir-146b


Accession
MI0009745
Description
Bos taurus bta-mir-146b precursor miRNA
Gene family
MIPF0000103; mir-146

Literature search
19 open access papers mention bta-mir-146b
(50 sentences)

Sequence

18067 reads, 361 reads per million, 74 experiments
uaagagaacuuuggccaccuggcucUGAGAACUGAAUUCCAUAGGCUGUgagcucuagcaaaugcccuagggacucaguucuggugcccggcugugcuacaccauc
...........((((((((.(((.((.((((((((.((((.((((.(((..((....))..))).)))))))).)))))))))).))).)).)).)))).......

Structure
uaagagaacuu    -  -  u   u  G        A    A    C   ga  u 
           uggc ca cc ggc cU AGAACUGA UUCC UAGG UGU  gc c
           |||| || || ||| || |||||||| |||| |||| |||  ||  
           aucg gu gg ccg gg ucuugacu aggg aucc gua  cg u
----cuaccac    u  c  c   u  -        c    -    c   aa  a 


Annotation confidence Not enough data
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Genome context
chr26: 23050499-23050604 [+]

Database links

Mature bta-miR-146b

Accession MIMAT0009235
Description Bos taurus bta-miR-146b mature miRNA
Sequence 26 - UGAGAACUGAAUUCCAUAGGCUGU - 49
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125