miRBase entry: bta-mir-146a

Stem-loop bta-mir-146a


Accession
MI0009746
Description
Bos taurus bta-mir-146a precursor miRNA
Gene family
MIPF0000103; mir-146

Literature search
32 open access papers mention bta-mir-146a
(201 sentences)

Sequence

55848 reads, 926 reads per million, 69 experiments
cccauguguauccucagcuuUGAGAACUGAAUUCCAUAGGUUGUgucagugucagaccugugaaguuuaguucuuuagcugggauaucucuaucauccu
.......((((((.(((((..((((((((((((.((((((((.((.......)))))))))).)))))))))))).)))))))))))............

Structure
-----cccaugu      u     uU            C        G  uc 
            guaucc cagcu  GAGAACUGAAUU CAUAGGUU Ug  a
            |||||| |||||  |||||||||||| |||||||| ||  g
            uauagg gucga  uucuugauuuga guguccag ac  u
uccuacuaucuc      -     -u            a        -  ug 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr7: 74529534-74529632 [+]

Database links

Mature bta-miR-146a

Accession MIMAT0009236
Description Bos taurus bta-miR-146a mature miRNA
Sequence 21 - UGAGAACUGAAUUCCAUAGGUUGU - 44
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125