miRBase entry: bta-mir-208a

Stem-loop bta-mir-208a


Accession
MI0009773
Description
Bos taurus bta-mir-208a precursor miRNA
Gene family
MIPF0000178; mir-208

Literature search
2 open access papers mention bta-mir-208a
(3 sentences)

Sequence

3 reads, 0 reads per million, 3 experiments
ugacgggcgagcuuuuggcccggguuauaccugaugcucacguAUAAGACGAGCAAAAAGCUUGUugguca
((((.(((((((((((.((.((..((((((.(((...))).))))))..)).)).))))))))))).))))

Structure
    g           g  c  gg      c   u 
ugac ggcgagcuuuu gc cg  uuauac uga  
|||| ||||||||||| || ||  |||||| ||| g
acug uUGUUCGAAAA CG GC  AAUAug acu  
    g           A  A  AG      c   c 


Annotation confidence Not enough data
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Genome context
chr10: 21413140-21413210 [+]

Database links

Mature bta-miR-208a

Accession MIMAT0009261
Description Bos taurus bta-miR-208a mature miRNA
Sequence 44 - AUAAGACGAGCAAAAAGCUUGU - 65
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125